Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_15> ?p ?o ?g. }
Showing items 1 to 20 of
20
with 100 items per page.
- CS202002013_15 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_15 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_15 cell_set_label "RNAseq 015" @default.
- CS202002013_15 cell_set_preferred_alias "Vip Serpinf1_1" @default.
- CS202002013_15 node_metadata "{"cell_set_preferred_alias": "Vip Serpinf1_1", "original_label": "Vip Serpinf1_1", "cell_set_label": "RNAseq 015", "cell_set_accession": "CS202002013_15", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#A720FF"}" @default.
- CS202002013_15 original_label "Vip Serpinf1_1" @default.
- CS202002013_15 PCL_0010051 "Cell Type" @default.
- CS202002013_15 PCL_0010059 "CS202002013_15" @default.
- CS202002013_15 RO_0015003 CS202002013_140 @default.
- CS202002013_15 RO_0015003 CS202002013_241 @default.
- CS202002013_15 hasRelatedSynonym "L5/6 CCK cell" @default.
- CS202002013_15 hasRelatedSynonym "Vip-like_C3" @default.
- CS202002013_15 type B19bf0a3625c915b4382697cc3d8b8585 @default.
- CS202002013_15 type Bfb1608c6b8a54eb495c12cbda5bba909 @default.
- CS202002013_15 type PCL_0010001 @default.
- CS202002013_15 type NamedIndividual @default.
- CS202002013_15 comment "In Mouse primary motor cortex (CCN202002013), Vip Serpinf1_1 is a member of the Vip subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Rgs16 and Sfrp2 (F-beta = 0.536), based on the NS Forest method of marker gene selection. Vip Serpinf1_1 cells represent 1.48% of all Vip cells collected in the snRNA-seq 10X v3 B dataset. Vip Serpinf1_1 cells have an average of 4153 genes detected, which is 299 less than the average for all Vip cells (3854). Vip Serpinf1_1 cells have an average firing rate of 35.83 Hz, compared to 41.07 Hz for all Vip cells recorded. Other distinguishing features include an input resistance of 456.16 MOhms (409.69 MOhms in all Vip cells), and upstroke:downstroke ratio of 2.59 (2.32 for all Vip cells). The most distinguishing morpholgical features of Vip Serpinf1_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.78 vs. 0.36 average for all Vip cells), axon total length (7714.01 vs. 5125.69 microns for all Vip cells), dendrite total length (1699.67 vs. 2222.79 microns for all Vip cells), and stems (3.67 vs. 3.73 for all Vip cells)." @default.
- CS202002013_15 isDefinedBy cs202002013.owl @default.
- CS202002013_15 label "RNAseq 015 - CS202002013_15" @default.
- CS202002013_15 prefLabel "Vip Serpinf1_1" @default.