Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_22> ?p ?o ?g. }
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- CS202002013_22 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_22 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_22 cell_set_label "RNAseq 022" @default.
- CS202002013_22 cell_set_preferred_alias "Vip Mybpc1_1" @default.
- CS202002013_22 node_metadata "{"cell_set_preferred_alias": "Vip Mybpc1_1", "original_label": "Vip Mybpc1_1", "cell_set_label": "RNAseq 022", "cell_set_accession": "CS202002013_22", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#F70CF3"}" @default.
- CS202002013_22 original_label "Vip Mybpc1_1" @default.
- CS202002013_22 PCL_0010051 "Cell Type" @default.
- CS202002013_22 PCL_0010059 "CS202002013_22" @default.
- CS202002013_22 RO_0015003 CS202002013_147 @default.
- CS202002013_22 RO_0015003 CS202002013_241 @default.
- CS202002013_22 hasRelatedSynonym "L2/3 Bipolar VIP cell" @default.
- CS202002013_22 hasRelatedSynonym "Vip-like_C3" @default.
- CS202002013_22 type Ba7d9110c46cad54d6b28bdda00225ec4 @default.
- CS202002013_22 type Bad4e026ac52b446d97d5a00ccc923b2b @default.
- CS202002013_22 type PCL_0010001 @default.
- CS202002013_22 type NamedIndividual @default.
- CS202002013_22 comment "In Mouse primary motor cortex (CCN202002013), Vip Mybpc1_1 is a member of the Vip subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Calb2 and Gm2516 (F-beta = 0.436), based on the NS Forest method of marker gene selection. Vip Mybpc1_1 cells represent 4.69% of all Vip cells collected in the snRNA-seq 10X v3 B dataset. Vip Mybpc1_1 cells have an average of 4113 genes detected, which is 259 more than the average for all Vip cells (3854). Vip Mybpc1_1 cells have an average firing rate of 49.44 Hz, compared to 41.07 Hz for all Vip cells recorded. Other distinguishing features include an input resistance of 400.58 MOhms (409.69 MOhms in all Vip cells), and upstroke:downstroke ratio of 2.1 (2.32 for all Vip cells). The most distinguishing morpholgical features of Vip Mybpc1_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.21 vs. 0.36 average for all Vip cells), axon total length (4323.89 vs. 5125.69 microns for all Vip cells), dendrite total length (1968.73 vs. 2222.79 microns for all Vip cells), and stems (3.5 vs. 3.73 for all Vip cells)." @default.
- CS202002013_22 isDefinedBy cs202002013.owl @default.
- CS202002013_22 label "RNAseq 022 - CS202002013_22" @default.
- CS202002013_22 prefLabel "Vip Mybpc1_1" @default.