Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_24> ?p ?o ?g. }
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- CS202002013_24 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_24 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_24 cell_set_label "RNAseq 024" @default.
- CS202002013_24 cell_set_preferred_alias "Vip Mybpc1_3" @default.
- CS202002013_24 node_metadata "{"cell_set_preferred_alias": "Vip Mybpc1_3", "original_label": "Vip Mybpc1_3", "cell_set_label": "RNAseq 024", "cell_set_accession": "CS202002013_24", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#AB379C"}" @default.
- CS202002013_24 original_label "Vip Mybpc1_3" @default.
- CS202002013_24 PCL_0010051 "Cell Type" @default.
- CS202002013_24 PCL_0010059 "CS202002013_24" @default.
- CS202002013_24 RO_0015003 CS202002013_148 @default.
- CS202002013_24 hasRelatedSynonym "L2/3 Bipolar VIP cell" @default.
- CS202002013_24 hasRelatedSynonym "Vip-like_C1" @default.
- CS202002013_24 type B8c8b54db6946aa588bb5403bf29fe1f8 @default.
- CS202002013_24 type Bb507f10731066814c009d190f9c1af17 @default.
- CS202002013_24 type PCL_0010001 @default.
- CS202002013_24 type NamedIndividual @default.
- CS202002013_24 comment "In Mouse primary motor cortex (CCN202002013), Vip Mybpc1_3 is a member of the Vip subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Caln1 and Grm8 (F-beta = 0.571), based on the NS Forest method of marker gene selection. Vip Mybpc1_3 cells represent 6.21% of all Vip cells collected in the snRNA-seq 10X v3 B dataset. Vip Mybpc1_3 cells have an average of 3928 genes detected, which is 74 more than the average for all Vip cells (3854). Vip Mybpc1_3 cells have an average firing rate of 44.27 Hz, compared to 41.07 Hz for all Vip cells recorded. Other distinguishing features include an input resistance of 350.76 MOhms (409.69 MOhms in all Vip cells), and upstroke:downstroke ratio of 2.15 (2.32 for all Vip cells). The most distinguishing morpholgical features of Vip Mybpc1_3, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.3 vs. 0.36 average for all Vip cells), axon total length (4940.61 vs. 5125.69 microns for all Vip cells), dendrite total length (2615.03 vs. 2222.79 microns for all Vip cells), and stems (3.33 vs. 3.73 for all Vip cells)." @default.
- CS202002013_24 isDefinedBy cs202002013.owl @default.
- CS202002013_24 label "RNAseq 024 - CS202002013_24" @default.
- CS202002013_24 prefLabel "Vip Mybpc1_3" @default.