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- CS202002013_30 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_30 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_30 cell_set_label "RNAseq 030" @default.
- CS202002013_30 cell_set_preferred_alias "Sst Myh8_1" @default.
- CS202002013_30 node_metadata "{"cell_set_preferred_alias": "Sst Myh8_1", "original_label": "Sst Myh8_1", "cell_set_label": "RNAseq 030", "cell_set_accession": "CS202002013_30", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#FF9F2C"}" @default.
- CS202002013_30 original_label "Sst Myh8_1" @default.
- CS202002013_30 PCL_0010051 "Cell Type" @default.
- CS202002013_30 PCL_0010059 "CS202002013_30" @default.
- CS202002013_30 RO_0015003 CS202002013_155 @default.
- CS202002013_30 RO_0015003 CS202002013_256 @default.
- CS202002013_30 hasRelatedSynonym "L5 T Martinotti cell" @default.
- CS202002013_30 hasRelatedSynonym "Sst-like_C2" @default.
- CS202002013_30 type B93314caa35a6601a1988c7189e6a4b76 @default.
- CS202002013_30 type Bac0dd9da0128b413f2b02f815b55fbd3 @default.
- CS202002013_30 type PCL_0010001 @default.
- CS202002013_30 type NamedIndividual @default.
- CS202002013_30 comment "In Mouse primary motor cortex (CCN202002013), Sst Myh8_1 is a member of the Sst subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Il1rapl2 and Reln (F-beta = 0.811), based on the NS Forest method of marker gene selection. Sst Myh8_1 cells represent 17.64% of all Sst cells collected in the snRNA-seq 10X v3 B dataset. Sst Myh8_1 cells have an average of 4374 genes detected, which is 447 less than the average for all Sst cells (4821). Sst Myh8_1 cells have an average firing rate of 40.73 Hz, compared to 48.24 Hz for all Sst cells recorded. Other distinguishing features include an input resistance of 370.05 MOhms (270.6 MOhms in all Sst cells), and upstroke:downstroke ratio of 1.89 (1.91 for all Sst cells). The most distinguishing morpholgical features of Sst Myh8_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.46 vs. 0.41 average for all Sst cells), axon total length (12219.2 vs. 16640.19 microns for all Sst cells), dendrite total length (2296.72 vs. 2670.25 microns for all Sst cells), and stems (6 vs. 6.19 for all Sst cells)." @default.
- CS202002013_30 isDefinedBy cs202002013.owl @default.
- CS202002013_30 label "RNAseq 030 - CS202002013_30" @default.
- CS202002013_30 prefLabel "Sst Myh8_1" @default.