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- CS202002013_34 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_34 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_34 cell_set_label "RNAseq 034" @default.
- CS202002013_34 cell_set_preferred_alias "Sst Etv1" @default.
- CS202002013_34 node_metadata "{"cell_set_preferred_alias": "Sst Etv1", "original_label": "Sst Etv1", "cell_set_label": "RNAseq 034", "cell_set_accession": "CS202002013_34", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#FFB22B"}" @default.
- CS202002013_34 original_label "Sst Etv1" @default.
- CS202002013_34 PCL_0010051 "Cell Type" @default.
- CS202002013_34 PCL_0010059 "CS202002013_34" @default.
- CS202002013_34 RO_0015003 CS202002013_158 @default.
- CS202002013_34 RO_0015003 CS202002013_159 @default.
- CS202002013_34 RO_0015003 CS202002013_244 @default.
- CS202002013_34 hasRelatedSynonym "L5 T Martinotti cell" @default.
- CS202002013_34 hasRelatedSynonym "Sst-like_C2" @default.
- CS202002013_34 type B06bfb0aae9a888414e8f15a756766cb5 @default.
- CS202002013_34 type B94b2ab086abaa6f0d2ec03a7a2f5fa58 @default.
- CS202002013_34 type PCL_0010001 @default.
- CS202002013_34 type NamedIndividual @default.
- CS202002013_34 comment "In Mouse primary motor cortex (CCN202002013), Sst Etv1 is a member of the Sst subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Col19a1 and Fbn2 and Trpc6 (F-beta = 0.467), based on the NS Forest method of marker gene selection. Sst Etv1 cells represent 1.62% of all Sst cells collected in the snRNA-seq 10X v3 B dataset. Sst Etv1 cells have an average of 4980 genes detected, which is 159 more than the average for all Sst cells (4821). Sst Etv1 cells have an average firing rate of 56.17 Hz, compared to 48.24 Hz for all Sst cells recorded. Other distinguishing features include an input resistance of 246.5 MOhms (270.6 MOhms in all Sst cells), and upstroke:downstroke ratio of 1.9 (1.91 for all Sst cells). The most distinguishing morpholgical features of Sst Etv1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.44 vs. 0.41 average for all Sst cells), axon total length (20583.42 vs. 16640.19 microns for all Sst cells), dendrite total length (3732.09 vs. 2670.25 microns for all Sst cells), and stems (7 vs. 6.19 for all Sst cells)." @default.
- CS202002013_34 isDefinedBy cs202002013.owl @default.
- CS202002013_34 label "RNAseq 034 - CS202002013_34" @default.
- CS202002013_34 prefLabel "Sst Etv1" @default.