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- CS202002013_36 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_36 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_36 cell_set_label "RNAseq 036" @default.
- CS202002013_36 cell_set_preferred_alias "Sst Crhr2_1" @default.
- CS202002013_36 node_metadata "{"cell_set_preferred_alias": "Sst Crhr2_1", "original_label": "Sst Crhr2_1", "cell_set_label": "RNAseq 036", "cell_set_accession": "CS202002013_36", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#BE8652"}" @default.
- CS202002013_36 original_label "Sst Crhr2_1" @default.
- CS202002013_36 PCL_0010051 "Cell Type" @default.
- CS202002013_36 PCL_0010059 "CS202002013_36" @default.
- CS202002013_36 RO_0015003 CS202002013_161 @default.
- CS202002013_36 RO_0015003 CS202002013_245 @default.
- CS202002013_36 hasRelatedSynonym "L5 non-Martinotti cell" @default.
- CS202002013_36 hasRelatedSynonym "Sst-like_C3" @default.
- CS202002013_36 type B0afc8061bf08862db2d52b783287b058 @default.
- CS202002013_36 type B0fb6b3ed9b0e99259d26bbcdd39e1e12 @default.
- CS202002013_36 type PCL_0010001 @default.
- CS202002013_36 type NamedIndividual @default.
- CS202002013_36 comment "In Mouse primary motor cortex (CCN202002013), Sst Crhr2_1 is a member of the Sst subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Eya4 and Nek7 and Trpc6 (F-beta = 0.582), based on the NS Forest method of marker gene selection. Sst Crhr2_1 cells represent 9.25% of all Sst cells collected in the snRNA-seq 10X v3 B dataset. Sst Crhr2_1 cells have an average of 5087 genes detected, which is 266 more than the average for all Sst cells (4821). Sst Crhr2_1 cells have an average firing rate of 56.15 Hz, compared to 48.24 Hz for all Sst cells recorded. Other distinguishing features include an input resistance of 251.69 MOhms (270.6 MOhms in all Sst cells), and upstroke:downstroke ratio of 1.84 (1.91 for all Sst cells). The most distinguishing morpholgical features of Sst Crhr2_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.64 vs. 0.41 average for all Sst cells), axon total length (17229.58 vs. 16640.19 microns for all Sst cells), dendrite total length (2630.1 vs. 2670.25 microns for all Sst cells), and stems (5.2 vs. 6.19 for all Sst cells)." @default.
- CS202002013_36 isDefinedBy cs202002013.owl @default.
- CS202002013_36 label "RNAseq 036 - CS202002013_36" @default.
- CS202002013_36 prefLabel "Sst Crhr2_1" @default.