Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_48> ?p ?o ?g. }
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- CS202002013_48 cell_set_additional_aliases "L6 FS cell w/ large sag" @default.
- CS202002013_48 cell_set_alias_assignee "Federico Scala" @default.
- CS202002013_48 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_48 cell_set_alias_citation "PMID:33184512" @default.
- CS202002013_48 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_48 cell_set_label "RNAseq 048" @default.
- CS202002013_48 cell_set_preferred_alias "Pvalb Gabrg1" @default.
- CS202002013_48 node_metadata "{"cell_set_preferred_alias": "Pvalb Gabrg1", "original_label": "Pvalb Gabrg1", "cell_set_label": "RNAseq 048", "cell_set_accession": "CS202002013_48", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "L6 FS cell w/ large sag", "cell_set_alias_assignee": "Zizhen Yao|Federico Scala", "cell_set_alias_citation": "PMID:34616066|PMID:33184512", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#ED4C50"}" @default.
- CS202002013_48 original_label "Pvalb Gabrg1" @default.
- CS202002013_48 PCL_0010051 "Cell Type" @default.
- CS202002013_48 PCL_0010059 "CS202002013_48" @default.
- CS202002013_48 RO_0015003 CS202002013_169 @default.
- CS202002013_48 RO_0015003 CS202002013_248 @default.
- CS202002013_48 hasExactSynonym "L6 FS cell w/ large sag" @default.
- CS202002013_48 hasRelatedSynonym "L6 FS cell w/ large sag" @default.
- CS202002013_48 hasRelatedSynonym "Pvalb-like_C2" @default.
- CS202002013_48 type B24dcde4e58331b103203fcc9d203ea71 @default.
- CS202002013_48 type B80af5b993a4a34ec1cc51ae129c9b086 @default.
- CS202002013_48 type PCL_0010001 @default.
- CS202002013_48 type NamedIndividual @default.
- CS202002013_48 comment "In Mouse primary motor cortex (CCN202002013), Pvalb Gabrg1 is a member of the Pvalb subclass. Pvalb Gabrg1 includes the Patch-seq and connectivity types L6 FS cell w/ large sag. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gabrg1 and Th (F-beta = 0.688), based on the NS Forest method of marker gene selection. Pvalb Gabrg1 cells represent 4.53% of all Pvalb cells collected in the snRNA-seq 10X v3 B dataset. Pvalb Gabrg1 cells have an average of 4590 genes detected, which is 457 less than the average for all Pvalb cells (5047). Pvalb Gabrg1 cells have an average firing rate of 101.94 Hz, compared to 121.98 Hz for all Pvalb cells recorded. Other distinguishing features include an input resistance of 293.37 MOhms (175.36 MOhms in all Pvalb cells), and upstroke:downstroke ratio of 1.43 (1.24 for all Pvalb cells). The most distinguishing morpholgical features of Pvalb Gabrg1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.86 vs. 0.48 average for all Pvalb cells), axon total length (12120.34 vs. 16688.56 microns for all Pvalb cells), dendrite total length (2078.6 vs. 1892.01 microns for all Pvalb cells), and stems (5 vs. 5.8 for all Pvalb cells)." @default.
- CS202002013_48 isDefinedBy cs202002013.owl @default.
- CS202002013_48 label "RNAseq 048 - CS202002013_48" @default.
- CS202002013_48 prefLabel "Pvalb Gabrg1" @default.