Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_49> ?p ?o ?g. }
Showing items 1 to 21 of
21
with 100 items per page.
- CS202002013_49 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_49 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_49 cell_set_label "RNAseq 049" @default.
- CS202002013_49 cell_set_preferred_alias "Pvalb Egfem1" @default.
- CS202002013_49 node_metadata "{"cell_set_preferred_alias": "Pvalb Egfem1", "original_label": "Pvalb Egfem1", "cell_set_label": "RNAseq 049", "cell_set_accession": "CS202002013_49", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#C05661"}" @default.
- CS202002013_49 original_label "Pvalb Egfem1" @default.
- CS202002013_49 PCL_0010051 "Cell Type" @default.
- CS202002013_49 PCL_0010059 "CS202002013_49" @default.
- CS202002013_49 RO_0015003 CS202002013_172 @default.
- CS202002013_49 RO_0015003 CS202002013_248 @default.
- CS202002013_49 RO_0015003 CS202002013_257 @default.
- CS202002013_49 hasRelatedSynonym "Lower FS Basket cell" @default.
- CS202002013_49 hasRelatedSynonym "Pvalb-like_C2" @default.
- CS202002013_49 type B18eede10930aad001aa40a184e538c7d @default.
- CS202002013_49 type Bbbbcd1d8be2269532f6fd0bb40e5d5f2 @default.
- CS202002013_49 type PCL_0010001 @default.
- CS202002013_49 type NamedIndividual @default.
- CS202002013_49 comment "In Mouse primary motor cortex (CCN202002013), Pvalb Egfem1 is a member of the Pvalb subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is 9330158H04Rik and Plch1 and Tac1 (F-beta = 0.45), based on the NS Forest method of marker gene selection. Pvalb Egfem1 cells represent 3.03% of all Pvalb cells collected in the snRNA-seq 10X v3 B dataset. Pvalb Egfem1 cells have an average of 5303 genes detected, which is 256 more than the average for all Pvalb cells (5047). Pvalb Egfem1 cells have an average firing rate of 108.03 Hz, compared to 121.98 Hz for all Pvalb cells recorded. Other distinguishing features include an input resistance of 247.31 MOhms (175.36 MOhms in all Pvalb cells), and upstroke:downstroke ratio of 1.34 (1.24 for all Pvalb cells). The most distinguishing morpholgical features of Pvalb Egfem1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.84 vs. 0.48 average for all Pvalb cells), axon total length (11564.71 vs. 16688.56 microns for all Pvalb cells), dendrite total length (1985.21 vs. 1892.01 microns for all Pvalb cells), and stems (6 vs. 5.8 for all Pvalb cells)." @default.
- CS202002013_49 isDefinedBy cs202002013.owl @default.
- CS202002013_49 label "RNAseq 049 - CS202002013_49" @default.
- CS202002013_49 prefLabel "Pvalb Egfem1" @default.