Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_50> ?p ?o ?g. }
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- CS202002013_50 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_50 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_50 cell_set_label "RNAseq 050" @default.
- CS202002013_50 cell_set_preferred_alias "Pvalb Gpr149" @default.
- CS202002013_50 node_metadata "{"cell_set_preferred_alias": "Pvalb Gpr149", "original_label": "Pvalb Gpr149", "cell_set_label": "RNAseq 050", "cell_set_accession": "CS202002013_50", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#E62A5D"}" @default.
- CS202002013_50 original_label "Pvalb Gpr149" @default.
- CS202002013_50 PCL_0010051 "Cell Type" @default.
- CS202002013_50 PCL_0010059 "CS202002013_50" @default.
- CS202002013_50 RO_0015003 CS202002013_173 @default.
- CS202002013_50 RO_0015003 CS202002013_257 @default.
- CS202002013_50 hasRelatedSynonym "Lower FS Basket cell" @default.
- CS202002013_50 hasRelatedSynonym "Pvalb-like_C1" @default.
- CS202002013_50 type B605839251fb0406cc93fcb7a9b2f900e @default.
- CS202002013_50 type Bec216a6ed3e33054a9e791e6468f0d18 @default.
- CS202002013_50 type PCL_0010001 @default.
- CS202002013_50 type NamedIndividual @default.
- CS202002013_50 comment "In Mouse primary motor cortex (CCN202002013), Pvalb Gpr149 is a member of the Pvalb subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Fzd6 and Slit2 and Syt2 (F-beta = 0.746), based on the NS Forest method of marker gene selection. Pvalb Gpr149 cells represent 11.19% of all Pvalb cells collected in the snRNA-seq 10X v3 B dataset. Pvalb Gpr149 cells have an average of 5376 genes detected, which is 329 more than the average for all Pvalb cells (5047). Pvalb Gpr149 cells have an average firing rate of 149.43 Hz, compared to 121.98 Hz for all Pvalb cells recorded. Other distinguishing features include an input resistance of 188.8 MOhms (175.36 MOhms in all Pvalb cells), and upstroke:downstroke ratio of 1.15 (1.24 for all Pvalb cells). The most distinguishing morpholgical features of Pvalb Gpr149, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.57 vs. 0.48 average for all Pvalb cells), axon total length (14317.76 vs. 16688.56 microns for all Pvalb cells), dendrite total length (1835.57 vs. 1892.01 microns for all Pvalb cells), and stems (5.62 vs. 5.8 for all Pvalb cells)." @default.
- CS202002013_50 isDefinedBy cs202002013.owl @default.
- CS202002013_50 label "RNAseq 050 - CS202002013_50" @default.
- CS202002013_50 prefLabel "Pvalb Gpr149" @default.