Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_57> ?p ?o ?g. }
Showing items 1 to 18 of
18
with 100 items per page.
- CS202002013_57 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_57 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_57 cell_set_label "RNAseq 057" @default.
- CS202002013_57 cell_set_preferred_alias "Pvalb Vipr2_2" @default.
- CS202002013_57 node_metadata "{"cell_set_preferred_alias": "Pvalb Vipr2_2", "original_label": "Pvalb Vipr2_2", "cell_set_label": "RNAseq 057", "cell_set_accession": "CS202002013_57", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#F4358B"}" @default.
- CS202002013_57 original_label "Pvalb Vipr2_2" @default.
- CS202002013_57 PCL_0010051 "Cell Type" @default.
- CS202002013_57 PCL_0010059 "CS202002013_57" @default.
- CS202002013_57 RO_0015003 CS202002013_178 @default.
- CS202002013_57 hasRelatedSynonym "Chandelier cell" @default.
- CS202002013_57 type B06216d21c7ba288dd6489ff7d701243f @default.
- CS202002013_57 type Be7e861db5dbab7e06fc1e6c77b5da8e5 @default.
- CS202002013_57 type PCL_0010001 @default.
- CS202002013_57 type NamedIndividual @default.
- CS202002013_57 comment "In Mouse primary motor cortex (CCN202002013), Pvalb Vipr2_2 is a member of the Pvalb subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Cntnap5b and Unc5b (F-beta = 0.832), based on the NS Forest method of marker gene selection. Pvalb Vipr2_2 cells represent 3.21% of all Pvalb cells collected in the snRNA-seq 10X v3 B dataset. Pvalb Vipr2_2 cells have an average of 4514 genes detected, which is 533 less than the average for all Pvalb cells (5047). Pvalb Vipr2_2 cells have an average firing rate of 78.82 Hz, compared to 121.98 Hz for all Pvalb cells recorded. Other distinguishing features include an input resistance of 203.7 MOhms (175.36 MOhms in all Pvalb cells), and upstroke:downstroke ratio of 1.39 (1.24 for all Pvalb cells). The most distinguishing morpholgical features of Pvalb Vipr2_2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.2 vs. 0.48 average for all Pvalb cells), axon total length (10473.78 vs. 16688.56 microns for all Pvalb cells), dendrite total length (1168.63 vs. 1892.01 microns for all Pvalb cells), and stems (5.67 vs. 5.8 for all Pvalb cells)." @default.
- CS202002013_57 isDefinedBy cs202002013.owl @default.
- CS202002013_57 label "RNAseq 057 - CS202002013_57" @default.
- CS202002013_57 prefLabel "Pvalb Vipr2_2" @default.