Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_60> ?p ?o ?g. }
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- CS202002013_60 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_60 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_60 cell_set_label "RNAseq 060" @default.
- CS202002013_60 cell_set_preferred_alias "L2/3 IT_3" @default.
- CS202002013_60 node_metadata "{"cell_set_preferred_alias": "L2/3 IT_3", "original_label": "L2/3 IT_3", "cell_set_label": "RNAseq 060", "cell_set_accession": "CS202002013_60", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#2EB934"}" @default.
- CS202002013_60 original_label "L2/3 IT_3" @default.
- CS202002013_60 PCL_0010051 "Cell Type" @default.
- CS202002013_60 PCL_0010059 "CS202002013_60" @default.
- CS202002013_60 RO_0015003 CS202002013_183 @default.
- CS202002013_60 type B341dd7bde51779d2460b4ef0e06aea08 @default.
- CS202002013_60 type Bb0966275a74123e8ae7715381e955cde @default.
- CS202002013_60 type PCL_0010001 @default.
- CS202002013_60 type NamedIndividual @default.
- CS202002013_60 comment "In Mouse primary motor cortex (CCN202002013), L2/3 IT_3 is a member of the L2/3 IT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Cux2 and Slit3 and Stard8 (F-beta = 0.763), based on the NS Forest method of marker gene selection. L2/3 IT_3 cells represent 89.02% of all L2/3 IT cells collected in the snRNA-seq 10X v3 B dataset. L2/3 IT_3 cells have an average of 5192 genes detected, which is 39 less than the average for all L2/3 IT cells (5231). L2/3 IT_3 cells have an average firing rate of 17.31 Hz, compared to 17.34 Hz for all L2/3 IT cells recorded. Other distinguishing features include an input resistance of 91.8 MOhms (91.42 MOhms in all L2/3 IT cells), and upstroke:downstroke ratio of 4.49 (4.49 for all L2/3 IT cells). The most distinguishing morpholgical features of L2/3 IT_3, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.18 vs. 0.17 average for all L2/3 IT cells), dendrite total length (4674.93 vs. 4647.41 microns for all L2/3 IT cells), and stems (7.65 vs. 7.63 for all L2/3 IT cells)." @default.
- CS202002013_60 isDefinedBy cs202002013.owl @default.
- CS202002013_60 label "RNAseq 060 - CS202002013_60" @default.
- CS202002013_60 prefLabel "L2/3 IT_3" @default.