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- CS202002013_64 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_64 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_64 cell_set_label "RNAseq 064" @default.
- CS202002013_64 cell_set_preferred_alias "L5 IT_2" @default.
- CS202002013_64 node_metadata "{"cell_set_preferred_alias": "L5 IT_2", "original_label": "L5 IT_2", "cell_set_label": "RNAseq 064", "cell_set_accession": "CS202002013_64", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#4A9F93"}" @default.
- CS202002013_64 original_label "L5 IT_2" @default.
- CS202002013_64 PCL_0010051 "Cell Type" @default.
- CS202002013_64 PCL_0010059 "CS202002013_64" @default.
- CS202002013_64 RO_0015003 CS202002013_190 @default.
- CS202002013_64 hasRelatedSynonym "L5 IT_C2" @default.
- CS202002013_64 type B0ced03d8fafd029409a687eaf6dd27a3 @default.
- CS202002013_64 type Bd3860142002a554d5890a676784fa628 @default.
- CS202002013_64 type PCL_0010001 @default.
- CS202002013_64 type NamedIndividual @default.
- CS202002013_64 comment "In Mouse primary motor cortex (CCN202002013), L5 IT_2 is a member of the L5 IT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gm49678 and Adamts18 and Deptor and Man1a (F-beta = 0.409), based on the NS Forest method of marker gene selection. L5 IT_2 cells represent 1.95% of all L5 IT cells collected in the snRNA-seq 10X v3 B dataset. L5 IT_2 cells have an average of 6502 genes detected, which is 1000 more than the average for all L5 IT cells (5502). L5 IT_2 cells have an average firing rate of 30.48 Hz, compared to 27.88 Hz for all L5 IT cells recorded. Other distinguishing features include an input resistance of 95.53 MOhms (145.64 MOhms in all L5 IT cells), and upstroke:downstroke ratio of 3.76 (3.96 for all L5 IT cells). The most distinguishing morpholgical features of L5 IT_2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.5 vs. 0.47 average for all L5 IT cells), dendrite total length (7202.87 vs. 6248.91 microns for all L5 IT cells), and stems (7.75 vs. 7.98 for all L5 IT cells)." @default.
- CS202002013_64 isDefinedBy cs202002013.owl @default.
- CS202002013_64 label "RNAseq 064 - CS202002013_64" @default.
- CS202002013_64 prefLabel "L5 IT_2" @default.