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- CS202002013_68 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_68 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_68 cell_set_label "RNAseq 068" @default.
- CS202002013_68 cell_set_preferred_alias "L6 IT_2" @default.
- CS202002013_68 node_metadata "{"cell_set_preferred_alias": "L6 IT_2", "original_label": "L6 IT_2", "cell_set_label": "RNAseq 068", "cell_set_accession": "CS202002013_68", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#81791F"}" @default.
- CS202002013_68 original_label "L6 IT_2" @default.
- CS202002013_68 PCL_0010051 "Cell Type" @default.
- CS202002013_68 PCL_0010059 "CS202002013_68" @default.
- CS202002013_68 RO_0015003 CS202002013_192 @default.
- CS202002013_68 RO_0015003 CS202002013_250 @default.
- CS202002013_68 hasRelatedSynonym "L6 IT_C2" @default.
- CS202002013_68 type Bcad265ce2893f6712a89238505444b72 @default.
- CS202002013_68 type Be48987a681799ca190814a2badd46f2d @default.
- CS202002013_68 type PCL_0010001 @default.
- CS202002013_68 type NamedIndividual @default.
- CS202002013_68 comment "In Mouse primary motor cortex (CCN202002013), L6 IT_2 is a member of the L6 IT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Bmpr1b and C1ql3 and Ptpru (F-beta = 0.579), based on the NS Forest method of marker gene selection. L6 IT_2 cells represent 69.17% of all L6 IT cells collected in the snRNA-seq 10X v3 B dataset. L6 IT_2 cells have an average of 5161 genes detected, which is 44 less than the average for all L6 IT cells (5205). L6 IT_2 cells have an average firing rate of 33.87 Hz, compared to 35.14 Hz for all L6 IT cells recorded. Other distinguishing features include an input resistance of 192.19 MOhms (185.91 MOhms in all L6 IT cells), and upstroke:downstroke ratio of 4.19 (4.38 for all L6 IT cells). The most distinguishing morpholgical features of L6 IT_2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.82 vs. 0.81 average for all L6 IT cells), dendrite total length (3216.81 vs. 3273.05 microns for all L6 IT cells), and stems (6.32 vs. 6.11 for all L6 IT cells)." @default.
- CS202002013_68 isDefinedBy cs202002013.owl @default.
- CS202002013_68 label "RNAseq 068 - CS202002013_68" @default.
- CS202002013_68 prefLabel "L6 IT_2" @default.