Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_70> ?p ?o ?g. }
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- CS202002013_70 cell_set_additional_aliases "L5 ET (MY-projecting)" @default.
- CS202002013_70 cell_set_additional_aliases "L5 PT_1" @default.
- CS202002013_70 cell_set_additional_aliases "MY-projecting L5 ET" @default.
- CS202002013_70 cell_set_alias_assignee "Bosiljka Tasic" @default.
- CS202002013_70 cell_set_alias_assignee "Federico Scala" @default.
- CS202002013_70 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_70 cell_set_alias_citation "PMID:30382198" @default.
- CS202002013_70 cell_set_alias_citation "PMID:33184512" @default.
- CS202002013_70 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_70 cell_set_label "RNAseq 070" @default.
- CS202002013_70 cell_set_preferred_alias "L5 ET_1" @default.
- CS202002013_70 node_metadata "{"cell_set_preferred_alias": "L5 ET_1", "original_label": "L5 ET_1", "cell_set_label": "RNAseq 070", "cell_set_accession": "CS202002013_70", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "MY-projecting L5 ET|L5 ET (MY-projecting)|L5 PT_1", "cell_set_alias_assignee": "Zizhen Yao|Federico Scala|Bosiljka Tasic", "cell_set_alias_citation": "PMID:34616066|PMID:33184512|PMID:30382198", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#0D5D7E"}" @default.
- CS202002013_70 original_label "L5 ET_1" @default.
- CS202002013_70 PCL_0010051 "Cell Type" @default.
- CS202002013_70 PCL_0010059 "CS202002013_70" @default.
- CS202002013_70 RO_0015003 CS202002013_251 @default.
- CS202002013_70 hasExactSynonym "L5 ET (MY-projecting)" @default.
- CS202002013_70 hasExactSynonym "L5 PT_1" @default.
- CS202002013_70 hasExactSynonym "MY-projecting L5 ET" @default.
- CS202002013_70 hasRelatedSynonym "L5 ET (MY-projecting)" @default.
- CS202002013_70 hasRelatedSynonym "L5 ET_C1" @default.
- CS202002013_70 type B52727814bef010696d59498188aca28f @default.
- CS202002013_70 type Bf462200263e778193be8f96257764dd2 @default.
- CS202002013_70 type PCL_0010001 @default.
- CS202002013_70 type NamedIndividual @default.
- CS202002013_70 comment "In Mouse primary motor cortex (CCN202002013), L5 ET_1 is a member of the L5 ET subclass. L5 ET_1 includes the Patch-seq and connectivity types L5 ET (MY-projecting). The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Crym and Gm2164 and Npr3 (F-beta = 0.836), based on the NS Forest method of marker gene selection. L5 ET_1 cells represent 60.25% of all L5 ET cells collected in the snRNA-seq 10X v3 B dataset. L5 ET_1 cells have an average of 6636 genes detected, which is 56 more than the average for all L5 ET cells (6580). L5 ET_1 cells have an average firing rate of 31.93 Hz, compared to 30.92 Hz for all L5 ET cells recorded. Other distinguishing features include an input resistance of 91.42 MOhms (88.63 MOhms in all L5 ET cells), and upstroke:downstroke ratio of 3.58 (3.54 for all L5 ET cells). The most distinguishing morpholgical features of L5 ET_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.5 vs. 0.48 average for all L5 ET cells), dendrite total length (7690.37 vs. 7991.53 microns for all L5 ET cells), and stems (8.53 vs. 8.56 for all L5 ET cells)." @default.
- CS202002013_70 isDefinedBy cs202002013.owl @default.
- CS202002013_70 label "RNAseq 070 - CS202002013_70" @default.
- CS202002013_70 prefLabel "L5 ET_1" @default.