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- CS202002013_71 cell_set_additional_aliases "L5 PT_2" @default.
- CS202002013_71 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS202002013_71 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_71 cell_set_alias_citation "PMID:34616062" @default.
- CS202002013_71 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_71 cell_set_aligned_alias "L5 ET_2" @default.
- CS202002013_71 cell_set_label "RNAseq 071" @default.
- CS202002013_71 cell_set_preferred_alias "L5 ET_2" @default.
- CS202002013_71 node_metadata "{"cell_set_preferred_alias": "L5 ET_2", "original_label": "L5 ET_2", "cell_set_label": "RNAseq 071", "cell_set_accession": "CS202002013_71", "cell_set_aligned_alias": "L5 ET_2", "cell_set_additional_aliases": "L5 PT_2", "cell_set_alias_assignee": "Zizhen Yao|Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616066|PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#0B77A5"}" @default.
- CS202002013_71 original_label "L5 ET_2" @default.
- CS202002013_71 PCL_0010051 "Cell Type" @default.
- CS202002013_71 PCL_0010059 "CS202002013_71" @default.
- CS202002013_71 RO_0015003 CS202002013_195 @default.
- CS202002013_71 hasExactSynonym "L5 ET_2" @default.
- CS202002013_71 hasExactSynonym "L5 PT_2" @default.
- CS202002013_71 hasRelatedSynonym "Non-MY-projecting L5 ET" @default.
- CS202002013_71 type B5c97823bc30789b395805c6947ca9a05 @default.
- CS202002013_71 type B5e70423012835800fc3aef648e49f03d @default.
- CS202002013_71 type PCL_0010001 @default.
- CS202002013_71 type NamedIndividual @default.
- CS202002013_71 comment "In Mouse primary motor cortex (CCN202002013), L5 ET_2 is a member of the L5 ET subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Erg and Gpc5 and Trpc7 (F-beta = 0.693), based on the NS Forest method of marker gene selection. L5 ET_2 cells represent 12.58% of all L5 ET cells collected in the snRNA-seq 10X v3 B dataset. L5 ET_2 cells have an average of 6094 genes detected, which is 486 less than the average for all L5 ET cells (6580). L5 ET_2 cells have an average firing rate of 26.25 Hz, compared to 30.92 Hz for all L5 ET cells recorded. Other distinguishing features include an input resistance of 97.6 MOhms (88.63 MOhms in all L5 ET cells), and upstroke:downstroke ratio of 3.6 (3.54 for all L5 ET cells). The most distinguishing morpholgical features of L5 ET_2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.41 vs. 0.48 average for all L5 ET cells), dendrite total length (8200.62 vs. 7991.53 microns for all L5 ET cells), and stems (8.67 vs. 8.56 for all L5 ET cells)." @default.
- CS202002013_71 isDefinedBy cs202002013.owl @default.
- CS202002013_71 label "RNAseq 071 - CS202002013_71" @default.
- CS202002013_71 prefLabel "L5 ET_2" @default.