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- CS202002013_72 cell_set_additional_aliases "L5 PT_3" @default.
- CS202002013_72 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_72 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_72 cell_set_label "RNAseq 072" @default.
- CS202002013_72 cell_set_preferred_alias "L5 ET_3" @default.
- CS202002013_72 node_metadata "{"cell_set_preferred_alias": "L5 ET_3", "original_label": "L5 ET_3", "cell_set_label": "RNAseq 072", "cell_set_accession": "CS202002013_72", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "L5 PT_3", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#0B8AA5"}" @default.
- CS202002013_72 original_label "L5 ET_3" @default.
- CS202002013_72 PCL_0010051 "Cell Type" @default.
- CS202002013_72 PCL_0010059 "CS202002013_72" @default.
- CS202002013_72 RO_0015003 CS202002013_195 @default.
- CS202002013_72 RO_0015003 CS202002013_251 @default.
- CS202002013_72 hasExactSynonym "L5 PT_3" @default.
- CS202002013_72 hasRelatedSynonym "L5 ET_C1" @default.
- CS202002013_72 hasRelatedSynonym "Non-MY-projecting L5 ET" @default.
- CS202002013_72 type B7108c97e44e0ea097bcb9cf97c4689ab @default.
- CS202002013_72 type Bed0a4ef132f8709e66607e0d37a422ac @default.
- CS202002013_72 type PCL_0010001 @default.
- CS202002013_72 type NamedIndividual @default.
- CS202002013_72 comment "In Mouse primary motor cortex (CCN202002013), L5 ET_3 is a member of the L5 ET subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is 6430573F11Rik and Gpc5 and Reln and Trpc7 (F-beta = 0.507), based on the NS Forest method of marker gene selection. L5 ET_3 cells represent 7.9% of all L5 ET cells collected in the snRNA-seq 10X v3 B dataset. L5 ET_3 cells have an average of 6657 genes detected, which is 77 more than the average for all L5 ET cells (6580). L5 ET_3 cells have an average firing rate of 20.83 Hz, compared to 30.92 Hz for all L5 ET cells recorded. Other distinguishing features include an input resistance of 60.93 MOhms (88.63 MOhms in all L5 ET cells), and upstroke:downstroke ratio of 3.87 (3.54 for all L5 ET cells). The most distinguishing morpholgical features of L5 ET_3, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.46 vs. 0.48 average for all L5 ET cells), dendrite total length (7649.82 vs. 7991.53 microns for all L5 ET cells), and stems (9.25 vs. 8.56 for all L5 ET cells)." @default.
- CS202002013_72 isDefinedBy cs202002013.owl @default.
- CS202002013_72 label "RNAseq 072 - CS202002013_72" @default.
- CS202002013_72 prefLabel "L5 ET_3" @default.