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- CS202002013_73 cell_set_additional_aliases "L5 PT_4" @default.
- CS202002013_73 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_73 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_73 cell_set_label "RNAseq 073" @default.
- CS202002013_73 cell_set_preferred_alias "L5 ET_4" @default.
- CS202002013_73 node_metadata "{"cell_set_preferred_alias": "L5 ET_4", "original_label": "L5 ET_4", "cell_set_label": "RNAseq 073", "cell_set_accession": "CS202002013_73", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "L5 PT_4", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#0A75B1"}" @default.
- CS202002013_73 original_label "L5 ET_4" @default.
- CS202002013_73 PCL_0010051 "Cell Type" @default.
- CS202002013_73 PCL_0010059 "CS202002013_73" @default.
- CS202002013_73 RO_0015003 CS202002013_194 @default.
- CS202002013_73 RO_0015003 CS202002013_251 @default.
- CS202002013_73 hasExactSynonym "L5 PT_4" @default.
- CS202002013_73 hasRelatedSynonym "L5 ET_C1" @default.
- CS202002013_73 hasRelatedSynonym "Non-MY-projecting L5 ET" @default.
- CS202002013_73 type B172e1ffa93ca5e8dfdbc99851bd1efcd @default.
- CS202002013_73 type Beae8a0e9d8fc9a458d2df71a9d410f22 @default.
- CS202002013_73 type PCL_0010001 @default.
- CS202002013_73 type NamedIndividual @default.
- CS202002013_73 comment "In Mouse primary motor cortex (CCN202002013), L5 ET_4 is a member of the L5 ET subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gm2164 and Npsr1 (F-beta = 0.714), based on the NS Forest method of marker gene selection. L5 ET_4 cells represent 19.27% of all L5 ET cells collected in the snRNA-seq 10X v3 B dataset. L5 ET_4 cells have an average of 6588 genes detected, which is 8 more than the average for all L5 ET cells (6580). L5 ET_4 cells have an average firing rate of 33.89 Hz, compared to 30.92 Hz for all L5 ET cells recorded. Other distinguishing features include an input resistance of 87.05 MOhms (88.63 MOhms in all L5 ET cells), and upstroke:downstroke ratio of 3.25 (3.54 for all L5 ET cells). The most distinguishing morpholgical features of L5 ET_4, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.45 vs. 0.48 average for all L5 ET cells), dendrite total length (8799.22 vs. 7991.53 microns for all L5 ET cells), and stems (8.25 vs. 8.56 for all L5 ET cells)." @default.
- CS202002013_73 isDefinedBy cs202002013.owl @default.
- CS202002013_73 label "RNAseq 073 - CS202002013_73" @default.
- CS202002013_73 prefLabel "L5 ET_4" @default.