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- CS202002013_75 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_75 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_75 cell_set_label "RNAseq 075" @default.
- CS202002013_75 cell_set_preferred_alias "L6 CT Gpr139" @default.
- CS202002013_75 node_metadata "{"cell_set_preferred_alias": "L6 CT Gpr139", "original_label": "L6 CT Gpr139", "cell_set_label": "RNAseq 075", "cell_set_accession": "CS202002013_75", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#168577"}" @default.
- CS202002013_75 original_label "L6 CT Gpr139" @default.
- CS202002013_75 PCL_0010051 "Cell Type" @default.
- CS202002013_75 PCL_0010059 "CS202002013_75" @default.
- CS202002013_75 RO_0015003 CS202002013_199 @default.
- CS202002013_75 RO_0015003 CS202002013_252 @default.
- CS202002013_75 hasRelatedSynonym "L6 CT_C1" @default.
- CS202002013_75 type Baed9f711c272ac8e99fd84056817b98f @default.
- CS202002013_75 type Bc5be5f99461ad6b0a130953db6c9f943 @default.
- CS202002013_75 type PCL_0010001 @default.
- CS202002013_75 type NamedIndividual @default.
- CS202002013_75 comment "In Mouse primary motor cortex (CCN202002013), L6 CT Gpr139 is a member of the L6 CT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Acaa1b and Col23a1 and Gpr139 (F-beta = 0.572), based on the NS Forest method of marker gene selection. L6 CT Gpr139 cells represent 0.75% of all L6 CT cells collected in the snRNA-seq 10X v3 B dataset. L6 CT Gpr139 cells have an average of 5037 genes detected, which is 180 more than the average for all L6 CT cells (4857). The most distinguishing morpholgical features of L6 CT Gpr139, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.69 vs. 0.8 average for all L6 CT cells), dendrite total length (3990.1 vs. 2884.47 microns for all L6 CT cells), and stems (6 vs. 6.97 for all L6 CT cells)." @default.
- CS202002013_75 isDefinedBy cs202002013.owl @default.
- CS202002013_75 label "RNAseq 075 - CS202002013_75" @default.
- CS202002013_75 prefLabel "L6 CT Gpr139" @default.