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- CS202002013_77 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_77 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_77 cell_set_label "RNAseq 077" @default.
- CS202002013_77 cell_set_preferred_alias "L6 CT Grp" @default.
- CS202002013_77 node_metadata "{"cell_set_preferred_alias": "L6 CT Grp", "original_label": "L6 CT Grp", "cell_set_label": "RNAseq 077", "cell_set_accession": "CS202002013_77", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#2FBCE5"}" @default.
- CS202002013_77 original_label "L6 CT Grp" @default.
- CS202002013_77 PCL_0010051 "Cell Type" @default.
- CS202002013_77 PCL_0010059 "CS202002013_77" @default.
- CS202002013_77 RO_0015003 CS202002013_201 @default.
- CS202002013_77 hasRelatedSynonym "L6 CT_C1" @default.
- CS202002013_77 type B2459c2a727085652fb18693ffc75f944 @default.
- CS202002013_77 type B537510365fbbd00db2bb09739dd02c89 @default.
- CS202002013_77 type PCL_0010001 @default.
- CS202002013_77 type NamedIndividual @default.
- CS202002013_77 comment "In Mouse primary motor cortex (CCN202002013), L6 CT Grp is a member of the L6 CT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Grp and Meis2 and Pdzrn4 and Plcxd3 (F-beta = 0.435), based on the NS Forest method of marker gene selection. L6 CT Grp cells represent 2.51% of all L6 CT cells collected in the snRNA-seq 10X v3 B dataset. L6 CT Grp cells have an average of 4826 genes detected, which is 31 less than the average for all L6 CT cells (4857). L6 CT Grp cells have an average firing rate of 25 Hz, compared to 27.46 Hz for all L6 CT cells recorded. Other distinguishing features include an input resistance of 209.68 MOhms (204.84 MOhms in all L6 CT cells), and upstroke:downstroke ratio of 3.63 (3.41 for all L6 CT cells). The most distinguishing morpholgical features of L6 CT Grp, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.66 vs. 0.8 average for all L6 CT cells), dendrite total length (2602.56 vs. 2884.47 microns for all L6 CT cells), and stems (4 vs. 6.97 for all L6 CT cells)." @default.
- CS202002013_77 isDefinedBy cs202002013.owl @default.
- CS202002013_77 label "RNAseq 077 - CS202002013_77" @default.
- CS202002013_77 prefLabel "L6 CT Grp" @default.