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- CS202002013_78 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_78 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_78 cell_set_label "RNAseq 078" @default.
- CS202002013_78 cell_set_preferred_alias "L6 CT Pou3f2" @default.
- CS202002013_78 node_metadata "{"cell_set_preferred_alias": "L6 CT Pou3f2", "original_label": "L6 CT Pou3f2", "cell_set_label": "RNAseq 078", "cell_set_accession": "CS202002013_78", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#3E766C"}" @default.
- CS202002013_78 original_label "L6 CT Pou3f2" @default.
- CS202002013_78 PCL_0010051 "Cell Type" @default.
- CS202002013_78 PCL_0010059 "CS202002013_78" @default.
- CS202002013_78 RO_0015003 CS202002013_201 @default.
- CS202002013_78 hasRelatedSynonym "L6 CT_C1" @default.
- CS202002013_78 type B2c78861817987e174a9177b4d7379a9b @default.
- CS202002013_78 type B41767cf27e2659a9536c1c64bd1e5d43 @default.
- CS202002013_78 type PCL_0010001 @default.
- CS202002013_78 type NamedIndividual @default.
- CS202002013_78 comment "In Mouse primary motor cortex (CCN202002013), L6 CT Pou3f2 is a member of the L6 CT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Cdh18 and Gm10635 and Satb2 (F-beta = 0.721), based on the NS Forest method of marker gene selection. L6 CT Pou3f2 cells represent 9.67% of all L6 CT cells collected in the snRNA-seq 10X v3 B dataset. L6 CT Pou3f2 cells have an average of 5009 genes detected, which is 152 more than the average for all L6 CT cells (4857). L6 CT Pou3f2 cells have an average firing rate of 36.47 Hz, compared to 27.46 Hz for all L6 CT cells recorded. Other distinguishing features include an input resistance of 164.42 MOhms (204.84 MOhms in all L6 CT cells), and upstroke:downstroke ratio of 3.42 (3.41 for all L6 CT cells). The most distinguishing morpholgical features of L6 CT Pou3f2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.79 vs. 0.8 average for all L6 CT cells), dendrite total length (3434.76 vs. 2884.47 microns for all L6 CT cells), and stems (6.82 vs. 6.97 for all L6 CT cells)." @default.
- CS202002013_78 isDefinedBy cs202002013.owl @default.
- CS202002013_78 label "RNAseq 078 - CS202002013_78" @default.
- CS202002013_78 prefLabel "L6 CT Pou3f2" @default.