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- CS202002013_82 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_82 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_82 cell_set_label "RNAseq 082" @default.
- CS202002013_82 cell_set_preferred_alias "L6b Shisa6_1" @default.
- CS202002013_82 node_metadata "{"cell_set_preferred_alias": "L6b Shisa6_1", "original_label": "L6b Shisa6_1", "cell_set_label": "RNAseq 082", "cell_set_accession": "CS202002013_82", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#46306A"}" @default.
- CS202002013_82 original_label "L6b Shisa6_1" @default.
- CS202002013_82 PCL_0010051 "Cell Type" @default.
- CS202002013_82 PCL_0010059 "CS202002013_82" @default.
- CS202002013_82 RO_0015003 CS202002013_206 @default.
- CS202002013_82 type B20d51ffa13b1d9fbcce3888fe9f898fa @default.
- CS202002013_82 type Badd14f07ddecb9c7e684c6464d9f6b23 @default.
- CS202002013_82 type PCL_0010001 @default.
- CS202002013_82 type NamedIndividual @default.
- CS202002013_82 comment "In Mouse primary motor cortex (CCN202002013), L6b Shisa6_1 is a member of the L6b subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Cplx3 and Ly6g6e and Svil (F-beta = 0.429), based on the NS Forest method of marker gene selection. L6b Shisa6_1 cells represent 14.85% of all L6b cells collected in the snRNA-seq 10X v3 B dataset. L6b Shisa6_1 cells have an average of 5657 genes detected, which is 175 more than the average for all L6b cells (5482). L6b Shisa6_1 cells have an average firing rate of 25.83 Hz, compared to 28.79 Hz for all L6b cells recorded. Other distinguishing features include an input resistance of 271.96 MOhms (299.53 MOhms in all L6b cells), and upstroke:downstroke ratio of 4.84 (4.57 for all L6b cells). The most distinguishing morpholgical features of L6b Shisa6_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.89 vs. 0.89 average for all L6b cells), dendrite total length (2730.57 vs. 2881.17 microns for all L6b cells), and stems (6.67 vs. 5.67 for all L6b cells)." @default.
- CS202002013_82 isDefinedBy cs202002013.owl @default.
- CS202002013_82 label "RNAseq 082 - CS202002013_82" @default.
- CS202002013_82 prefLabel "L6b Shisa6_1" @default.