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- CS202002013_83 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_83 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_83 cell_set_label "RNAseq 083" @default.
- CS202002013_83 cell_set_preferred_alias "L6b Shisa6_2" @default.
- CS202002013_83 node_metadata "{"cell_set_preferred_alias": "L6b Shisa6_2", "original_label": "L6b Shisa6_2", "cell_set_label": "RNAseq 083", "cell_set_accession": "CS202002013_83", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#464576"}" @default.
- CS202002013_83 original_label "L6b Shisa6_2" @default.
- CS202002013_83 PCL_0010051 "Cell Type" @default.
- CS202002013_83 PCL_0010059 "CS202002013_83" @default.
- CS202002013_83 RO_0015003 CS202002013_206 @default.
- CS202002013_83 type B436775a41e86f222cc29206f0d1c5e67 @default.
- CS202002013_83 type B9c5e88a6793b9f2af4165c00308ebe14 @default.
- CS202002013_83 type PCL_0010001 @default.
- CS202002013_83 type NamedIndividual @default.
- CS202002013_83 comment "In Mouse primary motor cortex (CCN202002013), L6b Shisa6_2 is a member of the L6b subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Moxd1 and Nr4a2 (F-beta = 0.732), based on the NS Forest method of marker gene selection. L6b Shisa6_2 cells represent 23.18% of all L6b cells collected in the snRNA-seq 10X v3 B dataset. L6b Shisa6_2 cells have an average of 5367 genes detected, which is 115 less than the average for all L6b cells (5482). L6b Shisa6_2 cells have an average firing rate of 31.67 Hz, compared to 28.79 Hz for all L6b cells recorded. Other distinguishing features include an input resistance of 169.81 MOhms (299.53 MOhms in all L6b cells), and upstroke:downstroke ratio of 4.92 (4.57 for all L6b cells). The most distinguishing morpholgical features of L6b Shisa6_2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.91 vs. 0.89 average for all L6b cells), dendrite total length (3152.09 vs. 2881.17 microns for all L6b cells), and stems (4.33 vs. 5.67 for all L6b cells)." @default.
- CS202002013_83 isDefinedBy cs202002013.owl @default.
- CS202002013_83 label "RNAseq 083 - CS202002013_83" @default.
- CS202002013_83 prefLabel "L6b Shisa6_2" @default.