Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_85> ?p ?o ?g. }
Showing items 1 to 17 of
17
with 100 items per page.
- CS202002013_85 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_85 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_85 cell_set_label "RNAseq 085" @default.
- CS202002013_85 cell_set_preferred_alias "L6b Kcnip1" @default.
- CS202002013_85 node_metadata "{"cell_set_preferred_alias": "L6b Kcnip1", "original_label": "L6b Kcnip1", "cell_set_label": "RNAseq 085", "cell_set_accession": "CS202002013_85", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#573D90"}" @default.
- CS202002013_85 original_label "L6b Kcnip1" @default.
- CS202002013_85 PCL_0010051 "Cell Type" @default.
- CS202002013_85 PCL_0010059 "CS202002013_85" @default.
- CS202002013_85 RO_0015003 CS202002013_203 @default.
- CS202002013_85 type B01650b7993d5f640cf09978c456373a5 @default.
- CS202002013_85 type Bf5666c6c1f8f8850e93b4ed5c70cb63f @default.
- CS202002013_85 type PCL_0010001 @default.
- CS202002013_85 type NamedIndividual @default.
- CS202002013_85 comment "In Mouse primary motor cortex (CCN202002013), L6b Kcnip1 is a member of the L6b subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gm42557 and Olfr112 and Rxfp2 (F-beta = 0.533), based on the NS Forest method of marker gene selection. L6b Kcnip1 cells represent 3.79% of all L6b cells collected in the snRNA-seq 10X v3 B dataset. L6b Kcnip1 cells have an average of 5888 genes detected, which is 406 more than the average for all L6b cells (5482). L6b Kcnip1 cells have an average firing rate of 22.5 Hz, compared to 28.79 Hz for all L6b cells recorded. Other distinguishing features include an input resistance of 389.31 MOhms (299.53 MOhms in all L6b cells), and upstroke:downstroke ratio of 4.55 (4.57 for all L6b cells). The most distinguishing morpholgical features of L6b Kcnip1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.76 vs. 0.89 average for all L6b cells), dendrite total length (3182.11 vs. 2881.17 microns for all L6b cells), and stems (2.5 vs. 5.67 for all L6b cells)." @default.
- CS202002013_85 isDefinedBy cs202002013.owl @default.
- CS202002013_85 label "RNAseq 085 - CS202002013_85" @default.
- CS202002013_85 prefLabel "L6b Kcnip1" @default.